Add the following commands to you Apache configuration file to help make it more PCI compliant.
RewriteEngine On
RewriteCond %{REQUEST_METHOD} ^TRACE
RewriteRule .* - [F]
RewriteCond %{REQUEST_METHOD} ^TRACK
RewriteRule .* - [F]
SSLProtocol All -SSLv2 -SSLv3
SSLHonorCipherOrder on
SSLCipherSuite "EECDH+ECDSA+AESGCM EECDH+aRSA+AESGCM EECDH+ECDSA+SHA384 EECDH+ECDSA+SHA256 EECDH+aRSA+SHA384 EECDH+aRSA+SHA256 EECDH+aRSA+RC4 EECDH EDH+aRSA RC4 !aNULL !eNULL !LOW !3DES !MD5 !EXP !PSK !SRP !DSS"
Update: I have made some new notes in another blog post for requirements that helped a client pass an additional test with TrustWave